CNS Tumours (1p/19q codeletion, MGMT Promoter Methylation and IDH 1 & 2 Mutation)|
Accredited UKAS 7872.
CNS Tumour testing for 1p/19q co-deletion status, MGMT promoter methylation plus IDH 1&2 mutation testing.
PURPOSE OF PROGRAMME:
To establish the analytical and interpretative capabilities of the participating laboratory in CNS tumour testing.
|FFPE tumour sections for testing for 1p/19q co-deletion status||Qualitative detection of absence/presence of abnormality|
|MGMT promoter methylation||Qualitative detection of absence/presence of abnormality|
|IDH 1&2 mutation testing||Qualitative detection of absence/presence of abnormality|
MATERIAL PROVIDED: FFPE slides for testing.
DISTRIBUTIONS PER YEAR: 1
SAMPLES PER DISTRIBUTION: 4
FREQUENCY OF DISTRIBUTION: 1 distribution in accordance with the annual EQA timetable.
PROGRAMME OF ANALYSIS:
FFPE samples for four cases are sent to the laboratory, each with a referral card to mimic a routine diagnostic case. Instructions and a user guide are available on the website. The scheme is not prescriptive as to the technique used (e.g. array, NGS) provided the limitations of the test used are stated in the report (ISO15189). IDH 1&2 testing is for molecular characterisation of the mutation. Participants may use immunocytochemistry to determine IDH status – this is not covered by the EQA. The participant analyses the sample, interprets the results and reports via the CEQAS website. The EQA is open for 5 weeks. Results can be entered at any time during this period. Any non-submitting labs will be contacted and given 24 hours to submit a late result.
All EQA cases are validated prior to release. Results are assessed by a panel of experts against set marking criteria based upon professional guidelines. There are three marking categories, Analytical, Interpretation and Clerical Accuracy. Each category carries two points. Deductions are made in accordance with the severity of the omission. A “critical error” is an error made in either the analytical or interpretive category that could lead to serious clinical consequences or imply a significant lack of diagnostic skill or scientific knowledge on the part of the participating laboratory. All critical errors are given a zero score and are designated as poor performance. A critical error in one category may result in the remaining categories being left unmarked. Any poor performance is ratified by the Oncology Specialist Advisory Group.
Satisfactory/Poor. A non-submission is also given a poor performance.
PERSISTENT POOR PERFORMANCE:
This is defined as: a) Two poor performances in any oncology EQA in which the laboratory participates, over three or more distributions of material, within a 36 month rolling period; b) A poor performance within one year following a previous persistent poor performance designation.
The External Quality Assessment Scheme for Molecular Genetics was founded in 1991. In 1999 the Service became known as the UK National External Quality Assessment Service for Molecular Genetics. UK NEQAS for Molecular Genetics is part of NHS Lothian.